From chaos to tranquillity: a modern approach to the identification, nomenclature and phylogeny of Aspergillus Penicillium and other Eurotiales updated accepted species list

Fig. S1. Phylogenetic trees of Aspergillus sect. Candidi based on single gene datasets of BenA, CaM, RPB2 and ITS. Strains of recently described species are shown in bold coloured text. The tree was rooted to A. petersonii. Ex-type strains appear in bold and are indicated by a superscript T. Fig. S2. Phylogenetic trees of Aspergillus sect. Cervini based on single gene datasets of BenA, CaM, RPB2 and ITS. Strains of recently described species are shown in bold coloured text. The tree was rooted to A. acidohumus. Ex-type strains appear in bold and are indicated by a superscript T. Fig. S3. Phylogenetic trees of Aspergillus sect. Cremei based on single gene datasets of BenA, CaM, RPB2 and ITS. Strains of recently described species are shown in bold coloured text. The tree was midpoint rooted. Ex-type strains appear in bold and are indicated by a superscript T. Fig. S4. Phylogenetic trees of Aspergillus sect. Flavi based on single gene datasets of BenA, CaM, RPB2 and ITS. Strains of recently described species are shown in bold coloured text. The tree was midpoint rooted. Ex-type strains appear in bold and are indicated by a superscript T. Fig. S5. Phylogenetic trees of Aspergillus sect. Flavipedes based on single gene datasets of BenA, CaM, RPB2 and ITS. Strains of recently described species are shown in bold coloured text. The tree was rooted to A. flavipes. Ex-type strains appear in bold and are indicated by a superscript T. Fig. S6. Phylogenetic trees of Aspergillus sect. Fumgati based on single gene datasets of BenA, CaM, RPB2 and ITS. Strains of recently described species are shown in bold coloured text. The tree was midpoint rooted. Ex-type strains appear in bold and are indicated by a superscript T. Fig. S7. Phylogenetic trees of Aspergillus sect. Nidulantes ser. Stellati based on single gene datasets of BenA, CaM, RPB2 and ITS. Strains of recently described species are shown in bold coloured text. The tree was rooted to A. versicolor. Ex-type strains appear in bold and are indicated by a superscript T. Fig. S8. Phylogenetic trees of Aspergillus sect. Nigri based on single gene datasets of BenA, CaM, RPB2 and ITS. Strains of recently described species are shown in bold coloured text. The tree was midpoint rooted. Ex-type strains appear in bold and are indicated by a superscript T. Fig. S9. Phylogenetic trees of Aspergillus sect. Polypaecilum based on single gene datasets of BenA, CaM, RPB2 and ITS. Strains of recently described species are shown in bold coloured text. The tree was rooted to A. whitfieldii. Ex-type strains appear in bold and are indicated by a superscript T. Fig. S10. Phylogenetic trees of Aspergillus sect. Restricti based on single gene datasets of BenA, CaM, RPB2 and ITS. Strains of recently described species are shown in bold coloured text. The tree was midpoint rooted. Ex-type strains appear in bold and are indicated by a superscript T. Fig. S11. Phylogenetic trees of Aspergillus sect. Terrei based on single gene datasets of BenA, CaM, RPB2 and ITS. Strains of recently described species are shown in bold coloured text. The tree was midpoint rooted. Ex-type strains appear in bold and are indicated by a superscript T. Fig. S12. Phylogenetic trees of Penicillium sect. Aspergilloides ser. Glabra based on single gene datasets of BenA, CaM, RPB2 and ITS. Strains of recently described species are shown in bold coloured text. The tree was rooted to P. thiersii. Ex-type strains appear in bold and are indicated by a superscript T. Fig. S13. Phylogenetic trees of Penicillium sect. Aspergilloides ser. Pinetorum based on single gene datasets of BenA, CaM, RPB2 and ITS. Strains of recently described species are shown in bold coloured text. The tree was rooted to P. thiersii. Ex-type strains appear in bold and are indicated by a superscript T. Fig. S14. Phylogenetic trees of Penicillium sect. Brevicompacta based on single gene datasets of BenA, CaM, RPB2 and ITS. Strains of recently described species are shown in bold coloured text. The tree was rooted to P. tularense. Ex-type strains appear in bold and are indicated by a superscript T. Fig. S15. Phylogenetic trees of Canescentia based on single gene datasets of BenA, CaM, RPB2 and ITS. Strains of recently described species are shown in bold coloured text. The tree was rooted to P. sacculum. Ex-type strains appear in bold and are indicated by a superscript T. Fig. S16. Phylogenetic trees of Penicillium sect. Charlesia, Eremophila, Griseola, Guizhouorum and Thysanophora based on single gene datasets of BenA, CaM, RPB2 and ITS. Strains of recently described species are shown in bold coloured text. The tree was midpoint rooted. Ex-type strains appear in bold and are indicated by a superscript T. Fig. S17. Phylogenetic trees of Penicillium sect. Chrysogena based on single gene datasets of BenA, CaM, RPB2 and ITS. Strains of recently described species are shown in bold coloured text. The tree was midpoint rooted. Ex-type strains appear in bold and are indicated by a superscript T. Fig. S18. Phylogenetic trees of Penicillium sect. Cinnamopurpurea based on single gene datasets of BenA, CaM, RPB2 and ITS. Strains of recently described species are shown in bold coloured text. The tree was midpoint rooted. Ex-type strains appear in bold and are indicated by a superscript T. Fig. S19. Phylogenetic trees of Penicillium sect. Citrina part 1 based on single gene datasets of BenA, CaM, RPB2 and ITS. Strains of recently described species are shown in bold coloured text. The tree was midpoint rooted. Ex-type strains appear in bold and are indicated by a superscript T. Fig. S20. Phylogenetic trees of Penicillium sect. Citrina part 2 based on single gene datasets of BenA, CaM, RPB2 and ITS. Strains of recently described species are shown in bold coloured text. The tree was midpoint rooted. Ex-type strains appear in bold and are indicated by a superscript T. Fig. S21. Phylogenetic trees of Penicillium sect. Exilicaulis based on single gene datasets of BenA, CaM, RPB2 and ITS. Strains of recently described species are shown in bold coloured text. The tree was midpoint rooted. Ex-type strains appear in bold and are indicated by a superscript T. Fig. S22. Phylogenetic trees of Penicillium sect. Fasciculata ser. Camembertiorum based on single gene datasets of BenA, CaM, RPB2 and ITS. Strains of recently described species are shown in bold coloured text. The tree was rooted to P. viridicatum. Ex-type strains appear in bold and are indicated by a superscript T. Fig. S23. Phylogenetic trees of Penicillium sect. Gracilenta based on single gene datasets of BenA, CaM, RPB2 and ITS. Strains of recently described species are shown in bold coloured text. The tree was rooted to P. stolkiae. Ex-type strains appear in bold and are indicated by a superscript T. Fig. S24. Phylogenetic trees of Penicillium sect. Lanata-Divaricata ser. Dalearum based on single gene datasets of BenA, CaM, RPB2 and ITS. Strains of recently described species are shown in bold coloured text. The tree was rooted P. janthinellum. Ex-type strains appear in bold and are indicated by a superscript T. Fig. S25. Phylogenetic trees of Penicillium sect. Lanata-Divaricata ser. Janthinella based on single gene datasets of BenA, CaM, RPB2 and ITS. Strains of recently described species are shown in bold coloured text. The tree was rooted P. simplicissimum. Ex-type strains appear in bold and are indicated by a superscript T. Fig. S26. Phylogenetic trees of Penicillium sect. Lanata-Divaricata ser. Rolfsiorum based on single gene datasets of BenA, CaM, RPB2 and ITS. Strains of recently described species are shown in bold coloured text. The tree was rooted P. janthinellum. Ex-type strains appear in bold and are indicated by a superscript T. Fig. S27. Phylogenetic trees of Penicillium sect. Lanata-Divaricata ser. Simplicissimum based on single gene datasets of BenA, CaM, RPB2 and ITS. Strains of recently described species are shown in bold coloured text. The tree was rooted P. janthinellum. Ex-type strains appear in bold and are indicated by a superscript T. Fig. S28. Phylogenetic trees of Penicillium sect. Osmophila based on single gene datasets of BenA, CaM, RPB2 and ITS. Strains of recently described species are shown in bold coloured text. The tree was midpoint rooted. Ex-type strains appear in bold and are indicated by a superscript T. Fig. S29. Phylogenetic trees of Penicillium sect. Robsamsonia based on single gene datasets of BenA, CaM, RPB2 and ITS. Strains of recently described species are shown in bold coloured text. The tree was midpoint rooted. Ex-type strains appear in bold and are indicated by a superscript T. Fig. S30. Phylogenetic trees of Penicillium sect. Sclerotiorum ser. Adametziorum based on single gene datasets of BenA, CaM, RPB2 and ITS. Strains of recently described species are shown in bold coloured text. The tree was rooted to P. sclerotiorum. Ex-type strains appear in bold and are indicated by a superscript T. Fig. S31. Phylogenetic trees of Penicillium sect. Sclerotiorum ser. Herqueorum based on single gene datasets of BenA, CaM, RPB2 and ITS. Strains of recently described species are shown in bold coloured text. The tree was rooted to P. sclerotiorum. Ex-type strains appear in bold and are indicated by a superscript T. Fig. S32. Phylogenetic trees of Penicillium sect. Sclerotiorum ser. Sclerotiorum based on single gene datasets of BenA, CaM, RPB2 and ITS. Strains of recently described species are shown in bold coloured text. The tree was rooted to P. herquei. Ex-type strains appear in bold and are indicated by a superscript T