Opportunities, Limitations, and Soil Microbial Predictors of Yield Response to Bacillus atrophaeus and Mycorrhiza in Silage Maize

Nutrient surpluses in regions with intensive livestock farming challenge sustainable crop production and have driven interest in alternative fertilization strategies and microbial biostimulants. Although microbial inoculation (MO) has been extensively studied in plant production, its agronomic relevance under field conditions remains controversial due to inconsistent outcomes. To address these inconsistencies, we conducted three-year field trials on two well-fertilized sandy sites in northern Germany. A microbial consortium consisting of Rhizoglomus irregulare, Funneliformis mosseae, Funneliformis caledonium, and Bacillus atrophaeus Abi05 was applied to silage maize (cultivar Amaroc S230) under contrasting fertilization regimes. In two of three years, microbial inoculation increased dry mass yield in the absence of starter fertilization, whereas both a high nutrient input variant (100 kg ha−1 diammonium phosphate, DAP) and a lower nutrient input organo-mineral microgranular fertilizer (25 kg ha−1) suppressed inoculant effects. Notably, yields from plots amended solely with the microbial inoculant reached at least the same level as those obtained with starter fertilization. In the third year, under drought conditions, defined as soil water contents below 10% in the 0–30 cm depth, no positive yield responses to microbial inoculation were observed. Quantitative PCR-based analyses of pre-sowing soils revealed that the abundances of Firmicutes, β-Proteobacteria, and total fungi were associated with yield responses, with Firmicutes and β-Proteobacteria showing negative and fungi showing positive correlations; together, these microbial predictors explained 38% of the variance in inoculant-induced yield response. Our findings demonstrate that soil microbiome characteristics can predict inoculant performance and that microbial inoculation is most effective without starter fertilization and under adequate soil moisture.