The aim is to compare the performance of five Hi-C scaffolders using different reference genomes and assembly methods.
Compared five Hi-C scaffolders
Utilized multiple reference species
Evaluated under ideal and real-life conditions
Highlighted strengths and weaknesses of each scaffolder
Identified performance variations based on conditions
Abstract
We compare the performance of five Hi-C scaffolders using multiple reference species under both ideal and real-life conditions, thereby illuminating their strengths and weaknesses.