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May 16, 2026Canadian Respiratory Journal0 citationsOpen Access

Multiomics Approach Identifies Novel Genetic Determinants and Therapeutic Targets for Asthma

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FLFang LiuHCHongtao Cui阎阎梅

Key Points

  • This investigation aims to identify genetic components and potential therapeutic targets for asthma using a multiomics approach.
  • Analyzed transcriptomic data from the GSE43696 cohort comprising 20 healthy controls and 88 asthmatic cases.
  • Employed Mendelian randomization to identify seven causal genes associated with asthma predisposition.
  • Conducted functional enrichment studies to link identified genes to immune-related pathways.
  • Discovered six protective genes (OR < 1) and one risk-associated gene (CXCL6; OR > 1).
  • Validated five genes showing reduced expression in asthmatic samples.
  • Identified potential therapeutic candidates like KI-8751 and verrucarin-A through Connectivity Map analysis.

Abstract

Asthma constitutes a widespread chronic respiratory disease with multifactorial origins, in which definitive genetic components remain incompletely understood. This investigation synthesized transcriptomic data and Mendelian randomization (MR) to delineate causative genes contributing to asthma predisposition. Evaluation of the GSE43696 cohort disclosed 267 genes displaying expression alterations between healthy controls (n = 20) and asthmatic cases (n = 88). MR methods discerned seven causal genes, consisting of six protective determinants (GPRIN3, SHISA2, DUSP5, FCER1A, USP36, and LGALS2; OR 1). Independent validation with the GSE63142 series verified pronounced suppression of five genes in asthma specimens. Functional enrichment studies connected these genes to immune‐related cascades, including IL‐17/NF‐κB signal transduction and Th17 cell differentiation, alongside metabolic activities. Single‐cell transcriptomic assessment of 32, 809 cells exposed compartmentalized expression profiles: FCER1A and LGALS2 predominated in dendritic cells, DUSP5 in goblet cells, SHISA2 in ionocytes, and USP36 in T cells. Immune cell infiltration evaluation demonstrated shifted distributions of mast cells, eosinophils, and monocytes, exhibiting substantial linkages with immune mediators such as CCR5 and CXCL10. Transcription factor exploration recognized cisbp_M0561 as the predominant regulatory element. Connectivity Map–based interrogation nominated KI‐8751, verrucarin‐A, and homoharringtonine as plausible therapeutic candidates. This consolidated multiomics framework elucidates previously uncharacterized pathological processes and prospective treatment avenues for asthma.

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Cite This Study

Liu et al. (2026) studied this question.

synapsesocial.com/papers/6a080b17a487c87a6a40d253https://doi.org/10.1155/carj/6447989
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