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April 18, 2026Pattern Recognition0 citationsOpen Access

Edges: An expressive and efficient model for learning graph edit distance

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AMAldo MoscatelliMBMaxime BérarPHPierre Héroux

Key Points

  • This work aims to develop a deep learning model for predicting graph edit distance efficiently.
  • Developed Edges architecture for predicting graph edit distance as an edge prediction task.
  • Utilized a 3-Weisfeiler-Lehman expressive graph neural network for structural information embedding.
  • Formulated the problem as edge-level regression within a single instance graph.
  • Achieved end-to-end training without reliance on combinatorial matching solvers.
  • Demonstrated improved prediction accuracy on benchmark datasets.
  • Achieved state-of-the-art accuracy on datasets like AIDS, LINUX, and IMDB.
  • Maintained low latency during inference, indicating computational efficiency.

Abstract

In this paper, we introduce Edges , a novel deep architecture that aims at predicting the Graph Edit Distance (GED). Edges reformulates the quadratic assignment problem (QAP) associated to the GED problem as an edge prediction task within a GED instance graph constructed from the input graph pair. It uses a 3-Weisfeiler-Lehman expressive GNN, enabling to embed structural information at the edge level on this GED instance graph . It bypasses the need for costly matching solvers by directly predicting a soft assignment matrix through an end-to-end architecture. Extensive experiments on benchmark datasets demonstrate that the method enhances prediction accuracy through structural awareness while maintaining computational efficiency. • Reframe graph edit distance as edge-level regression on a single instance graph. • Use a 3-WL edge-centric GNN with a quadratic readout built on metric embeddings. • Train end-to-end without combinatorial solvers and enable fast, batched inference. • Achieve state-of-the-art accuracy on AIDS, LINUX, and IMDB with low latency. • Offer a simple, scalable pipeline grounded in quadratic assignment for GED.

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Cite This Study

Moscatelli et al. (2026) studied this question.

synapsesocial.com/papers/69e31f1a40886becb653e8d2https://doi.org/10.1016/j.patcog.2026.113764
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Also Consider

Synapse has enriched 5 closely related papers on similar clinical questions. Consider them for comparative context:

  1. 1Multidimensional Scaling: I. Theory and Method1952 · 2,155 citations
  2. 2A binary linear programming formulation of the graph edit distance2006 · 182 citations
  3. 3Inexact graph matching for structural pattern recognition1983 · 477 citations
  4. 4The Hungarian method for the assignment problem1955 · 12,930 citations
  5. 5Hardness of approximating graph transformation problem1994 · 36 citations