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March 5, 2026Experimental Neurobiology0 citationsOpen Access

AVATAR: AI Vision Analysis for Three-dimensional Action in Real-time

DKDae-Gun KimKSKwanhoo ShinASAnna Shin

Key Points

  • The aim is to develop an AI-based system for high-resolution behavioral analysis of mice in real-time.
  • Developed AVATAR for 3D mouse motion reconstruction from multi-view video footage.
  • Utilized key body part detection to create action skeletons for analysis.
  • Employed an LSTM-based model for classification of mouse behaviors with low-latency processing.
  • Implemented AVATARnet for pose detection and feature extraction during complex behaviors.
  • Used XGBoost classifier for automated action segmentation during predatory hunting.
  • Achieved near-human accuracy in 3D pose estimation of mice.
  • Enabled real-time closed-loop optogenetic stimulation with 100 ms latency.
  • Demonstrated robust classification of various mouse behaviors using dynamic features.
  • AVATAR successfully automated action segmentation in complex predatory behaviors.

Abstract

Artificial intelligence (AI) provides new opportunities for high-resolution behavioral analysis and automated, human-free experiments. Here we present AVATAR (AI Vision Analysis for Three-dimensional Action in Real-time). This AI-driven system reconstructs 3D mouse motions by detecting key body parts from synchronized multi-view videos and converting into action skeletons. AVATAR achieves near-human accuracy in pose estimation, enables robust extraction of kinematic and postural features, and supports scalable analysis of model animal behaviors. Using these features represented by 3D action skeleton, LSTM-based model reliably classifies freely moving mouse behaviors during various experimental paradigms with low-latency processing (100 ms) enables real-time closed-loop optogenetic stimulation. As a demonstration of generalizability, we applied AVATAR framework to bottom-view predatory hunting paradigm. AVATARnet accurately detected mouse poses and extracted dynamic behavioral features of the mouse. Using AVATARnet-driven dynamic features, an XGBoost-based classifier automated action segmentation annotation during complex predatory chasing behavior. Together, AVATAR provides 3D pose estimation, dynamic quantification, classification, and closed-loop manipulation in real-time.

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Cite This Study

Kim et al. (2026) studied this question.

synapsesocial.com/papers/69a91cbed6127c7a504bfa6chttps://doi.org/10.5607/en25044
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