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January 17, 2026Microorganisms0 citationsOpen Access

Functional Analysis of CRISPR-Cas9-Mediated Gene Deletion in E. coli DH5α on Membrane Permeability and Transformation Efficiency

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FLFeifan LengXLXinyi LiuJHJinli He

Key Points

  • This research aims to investigate how CRISPR/Cas9-mediated gene deletion affects membrane permeability and transformation efficiency in E. coli DH5α.
  • Utilized CRISPR/Cas9 to generate six mutant strains of E. coli DH5α.
  • Measured membrane permeability using electrical conductivity, ONPG hydrolysis, and PI fluorescence.
  • Analyzed plasmid transformation efficiency in mutant strains.
  • Conducted permeability simulations based on a prior established model.
  • The E. coli DH5α:ompA' strain showed the highest increase in membrane permeability.
  • Significant improvement in transformation efficiency was recorded for the E. coli DH5α:ompA' mutant.
  • A quantitative correlation between transformation efficiency and membrane permeability was established, conforming to the equation T = aP + c.

Abstract

This research utilized the CRISPR/Cas9 editing method to generate six mutant strains of Escherichia coli (E. coli) DH5α targeting specific genes. The functional characterization and phenotypic analysis confirmed the regulatory roles of these genes in modifying membrane permeability. The variations in membrane permeability among the mutant strains were assessed by measuring electrical conductivity, ortho-nitrophenyl-β-D-galactopyranoside (ONPG) hydrolysis, and propidium iodide (PI) fluorescence, with E. coli DH5α:ompA′ exhibiting the most pronounced increase in membrane permeability. The function of these genes in transformation was analyzed from physicochemical and microscopic perspectives. Assays of plasmid transformation efficiency revealed a significant enhancement in the E. coli DH5α:ompA′ mutant strain, underscoring the critical function of outer membrane proteins in DNA acquisition. Permeability simulations were performed utilizing the E. coli DH5α:ompA′ mutant strain, grounded in a previously established model. The quantitative correlation between transformation efficiency and membrane permeability in this mutant conformed to the equation T = aP + c.

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Cite This Study

Leng et al. (2026) studied this question.

synapsesocial.com/papers/696b2631d2a12237a93496f5https://doi.org/10.3390/microorganisms14010198
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