PulseExploreJournal ClubDebatesTrendingResearchersJournals
Instagram
HomeExploreJournal ClubTrending
Synapse
⌘+K
Synapse
January 20, 20260 citationsOpen Access

Structural and Mechanistic Insights into Azetidine-associated αKG-NHFe Enzyme OkaE with Multifunctional Catalysis

View Full Paper
JYJunjie Yu

Key Points

  • The research aims to uncover the multifunctionality and mechanistic details of the OkaE enzyme in catalyzing various reactions.
  • Utilized isotopic labeling studies to track oxygen incorporation during catalysis.
  • Conducted high-resolution crystallographic analysis of enzyme complexes to observe structural features.
  • Employed mutagenesis to investigate the role of specific amino acids in substrate binding and reaction pathway activation.
  • Performed QM/MM simulations to analyze the dynamic behavior of enzyme intermediates.
  • Identified OkaE's ability to perform sequential hydroxylation, epoxidation, and ring cleavage.
  • Discovered a non-canonical cis-serine conformation contributing to substrate stabilization.
  • Highlighted the significance of a methionine–π interaction network in the enzyme's functioning.
  • Showed that multiple reaction pathways can be activated at different positions on the substrate.

Abstract

α-Ketoglutarate-dependent mononuclear non-haem iron (αKG-NHFe) enzymes exhibit remarkable catalytic versatility. Here, we report that OkaE, previously known for azetidine formation, displays unexpected multifunctionality, enabling sequential hydroxylation, epoxidation, and ring cleavage. Isotopic labelling studies revealed that a second O2 molecule is incorporated within a single catalytic cycle. High-resolution crystal structures of the OkaE•CoII•αKG•okaramine A complex unveiled that a non-canonical cis-serine conformation within a β-hairpin and a unique methionine–π interaction network stabilized substrate binding. Mutagenesis and crystallographic analysis suggested that this network governs the spatial orientation of the substrate relative to the metallo-centre, thereby activating distinct reaction pathways at the 3a-OH or C8a positions. Furthermore, QM/MM simulations indicated that the catalytic cycle involved dynamic rotation of the FeIV=O species from a distal-type αKG binding mode. These findings elucidate the mechanistic basis of OkaE reactivity, highlighting its potential as a programmable biocatalyst for natural product diversification.

Ask AI
Helpful
Bookmark
Share
View Full Paper

Cite This Study

Junjie Yu (2026) studied this question.

synapsesocial.com/papers/696f1a849e64f732b51eebd7https://doi.org/10.5281/zenodo.18287257
Ask AI
Helpful
Bookmark
Share
View Full Paper