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February 2, 2026Journal of Integrative Plant Biology1 citationsOpen Access

A surrogate‐selection‐enhanced TnpBmax platform enables efficient genome editing in rice and tomato

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ELE. F. LiJXJiyong XieXLXinbo Li

Key Points

  • The aim is to enhance genome editing efficiency in rice and tomato using a new optimized platform.
  • Utilized TnpB, a RNA-guided nuclease, optimized for plant genome editing
  • Developed TnpBe5 by fusing enhanced RNA with T5 exonuclease
  • Coupled TnpBmax with a HYYG surrogate for enriched cell selection
  • Achieved a 2.5-fold increase in editing efficiency in rice
  • Reached up to 81.5% editing efficiency in selected cells
  • Ensured high homozygosity in genome-edited rice and tomato plants

Abstract

TnpB, a compact RNA-guided nuclease ancestral to Cas12, is optimized for plant genome editing. A 99-nt enhanced RNA and T5 exonuclease fusion generate TnpBe5, boosting rice editing 2.5-fold. Coupling with a single-strands annealing (SSA)-responsive HYYG surrogate (TnpBmax) enriches edited cells, achieving up to 81.5% efficiency and high homozygosity across rice and tomato.

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Cite This Study

Li et al. (2026) studied this question.

synapsesocial.com/papers/6980fb97c1c9540dea80d748https://doi.org/10.1111/jipb.70159
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Also Consider

Synapse has enriched 5 closely related papers on similar clinical questions. Consider them for comparative context:

  1. 1Boosting genome editing in plants with single transcript unit surrogate reporter systems2024 · 13 citations
  2. 2Genome editing in plants using the TnpB transposase system2024 · 26 citations
  3. 3A miniature alternative to Cas9 and Cas12: Transposon‐associated TnpB mediates targeted genome editing in plants2024 · 45 citations
  4. 4SuperDecode: An integrated toolkit for analyzing mutations induced by genome editing2025 · 16 citations
  5. 5IsDge10 is a hypercompact TnpB nuclease that confers efficient genome editing in rice2024 · 26 citations