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February 6, 20260 citationsOpen Access

Critical Sequence Identity in a Moving Reference Frame: A Relative Fidelity Model

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IMikutoshi miyamoto

Key Points

  • To determine the critical sequence identity Q required for optimal replication in a dynamic fitness landscape during early life.
  • Developed a minimal model of early life with a moving reference frame.
  • Utilized the Poisson approximation for mutation counts.
  • Derived conditions for critical threshold Q using gamma functions.
  • Analytically simplified conditions under high mutation expectations.
  • Identified critical sequence identity Q dependent on immediate parent similarity.
  • Showed that Q must be maintained to ensure effective replication.
  • Established that when mutation count is large, Q approximates to 1 - p.

Abstract

In this study, we derive the critical sequence identity Q required to maintain replicationfunction in a minimal model of early life. Unlike classical quasispecies models that assumea static fitness landscape, our model evaluates fitness based on relative similarity to theimmediate parent (a moving reference frame). Using the Poisson approximation to the binomial mutation count, we obtain the exactcondition for the critical threshold Q as follows: Q = maxq ∈ {0, 1/n, 2/n,. . . , 1 | Γ (1 + n − ⌊nq⌋, np) /Γ (1 + n − ⌊nq⌋) ≧ 1/2} where Γ (a, x) is the upper incomplete gamma function and ⌊x⌋denotes the floor func-tion. This result implies that the required sequence identity per generation must be at mostthe limit set by Q. In the regime where the expected number of mutations np is sufficientlylarge, this analytical threshold simplifies to Q ⋍ 1 - p.

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Cite This Study

ikutoshi miyamoto (2026) studied this question.

synapsesocial.com/papers/698585bd8f7c464f230094dchttps://doi.org/10.5281/zenodo.18488888
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