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February 19, 2026Nature Communications1 citationsOpen Access

Structural and mechanistic insights into azetidine-associated αKG-NHFe enzyme OkaE with multifunctional catalysis

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XWXinye WangJYJunjie YuTLTonghai Liu

Key Points

  • To elucidate the structural and mechanistic basis of OkaE's reactivity in azetidine synthesis.
  • Utilized isotopic labeling studies to track oxygen incorporation during catalytic cycles.
  • Performed crystal structure analysis of OkaE in complex with substrates and cofactors.
  • Conducted mutational and crystallographic analyses to investigate substrate binding and orientation.
  • Applied QM/MM simulations to model reaction pathways and dynamics of the enzyme.
  • Demonstrated that OkaE can catalyze sequential oxidations via a unique mechanism.
  • Identified the formation of neuokaramine IV as a novel product of the catalytic cycle.
  • Revealed the significance of a methionine–π interaction network in substrate binding and orientation.
  • Showed dynamic rotation of the Fe IV =O species may initiate reaction bifurcation.

Abstract

α -Ketoglutarate-dependent mononuclear non-haem iron ( α KG-NHFe) enzymes are catalytically versatile, yet OkaE is unique for synthesizing azetidine rings via C–C bond formation. Here, we report the unexpected multifunctionality of OkaE, which catalyzes sequential oxidations. Isotopic labelling studies demonstrate that a second O₂ molecule participates in sequential epoxidation and ring cleavage, incorporating two oxygen atoms within a single catalytic cycle to form the previously unknown structure, neuokaramine IV. Crystal structures of the OkaE•Co II • α KG•okaramine A complex unveil a unique methionine– π interaction network that facilitates substrate binding. Mutational and crystallographic analyses suggest this network fine-tunes substrate orientation relative to the metallo-centre, activating distinct reaction pathways at the 3a-OH or C8a positions. QM/MM simulations indicate that dynamic rotation of the Fe IV =O species initiates the cycle, enabling reaction bifurcation. This study elucidates the structural and mechanistic basis of OkaE’s reactivity, highlighting its potential as a programmable biocatalyst for natural product diversification.

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Cite This Study

Wang et al. (2026) studied this question.

synapsesocial.com/papers/6996712d80e1323b05ec0346https://doi.org/10.1038/s41467-026-69519-5
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