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February 22, 2026International Journal of Molecular Sciences0 citationsOpen Access

Structure–Reactivity Relationships in N-Methylpyridinium Aldoxime Isomers: Comparative Experimental and Computational Studies

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DMDanijela MusijaIPI. PicekRVRobert Vianello

Key Points

  • To explore how the positioning of the oxime group in n-methylpyridinium aldoximes affects their physicochemical properties and reactivity.
  • Experimental and computational analysis of PAM2-Cl, PAM3-I, and PAM4-I isomers
  • X-ray diffraction determined the crystal structure of PAM3-I
  • Spectroscopic analyses (UV–Vis, NMR, IR) assessed structural and electronic differences
  • Kinetic studies measured rate constants and stability of substitution reactions.
  • Density functional theory (DFT) analyzed atomic charge distribution and electronic properties.
  • Identified distinct ionization behaviors among PAM2-Cl, PAM3-I, and PAM4-I isomers.
  • Demonstrated how oxime group positioning impacts nucleophilicity and donor properties.
  • Established a comprehensive structure–reactivity map integrating crystallography and kinetic data.
  • DFT analysis provided insights into electronic structures beyond experimental observations.

Abstract

The relative position of the oxime group within pharmaceutically relevant pyridinium oximes is a pivotal factor that governs their intrinsic physicochemical properties and their biological reactivity. However, studies providing in-depth, molecular-level insight into these structure–reactivity relationships are still limited. In this work, we present an integrated experimental and computational study of N-methylpyridinium-2-aldoxime chloride (PAM2-Cl), N-methylpyridinium-3-aldoxime iodide (PAM3-I), and N-methylpyridinium-4-aldoxime iodide (PAM4-I), aimed at elucidating discrete differences in their ionization behavior, electronic structure, σ-donor properties, and nucleophilicity. The crystal structure of PAM3-I was determined by X-ray diffraction. Comparative structural and spectroscopic (UV–Vis, NMR, IR) analyses elucidated the structural and electronic effects arising from the position of the oxime group. Kinetic studies of substitution reactions with aquapentacyanoferrate(II) in aqueous solution enabled the determination of pentacyano(PAM)ferrate(II) formation and dissociation rate constants, coordination modes, pKa values of the coordinated ligands, complex stability constants, and σ-donating capabilities. The DFT-based analysis of atomic charge distribution transcended experimental limitations, offering a new perspective on electronic structure-related properties. This study presents the first side-by-side, internally consistent structure–reactivity map across PAM2, PAM3, and PAM4 isomers that triangulates crystallography, UV–Vis-derived pKa values, substitution kinetics, and DFT descriptors in a single framework.

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Cite This Study

Musija et al. (2026) studied this question.

synapsesocial.com/papers/699a9d3c482488d673cd30c0https://doi.org/10.3390/ijms27042015
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