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March 14, 2026Horticulturae0 citationsOpen Access

Characterization of the Dof Family Members in Citrus clementina (Hort. ex Tan.) and Functional Analysis of CcDof4 and CcDof6 in Phytophthora parasitica Resistance

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LHL. HuYLYun LvYXYutong Xie

Key Points

  • This research aims to characterize Dof transcription factors in Citrus clementina and analyze their role in disease resistance.
  • Identified 24 Dof genes in the Citrus clementina genome.
  • Conducted phylogenetic analysis to classify Dof proteins into clades.
  • Analyzed gene structure, conserved motifs, and promoter elements.
  • Performed expression profiling in response to phytohormones and stress.
  • Investigated the effects of CcDof4 and CcDof6 overexpression on resistance to Phytophthora parasitica.
  • Phylogenetic analysis revealed evolutionary conservation with Dof members from Arabidopsis.
  • CcDof genes show tissue-specific expression and response to phytohormones and stresses.
  • CcDof4 and CcDof6 overexpression enhanced resistance to P. parasitica.
  • Overexpression resulted in upregulation of SA pathway markers NPR1 and PR1.

Abstract

The Dof transcription factor family plays crucial roles in plant growth and stress responses. In this study, we identified 24 Dof genes (CcDof1–CcDof24) from the genome of Citrus clementina (Hort. ex Tan.). Phylogenetic analysis classified these proteins into six distinct clades, revealing evolutionary conservation with Dof members from Arabidopsis and tomato. Analysis of gene structure and conserved motifs showed that most CcDof genes are intronless or contain only a few introns, and their motif compositions are largely consistent with their phylogenetic relationships. Promoter analysis revealed a variety of cis-regulatory elements associated with light responsiveness, hormone signaling, and abiotic/biotic stress responses. Expression profiling demonstrated that CcDof genes exhibit tissue-specific expression patterns and are differentially regulated by various phytohormones (including ABA, SA, GA, and MeJA), low temperature stress, and infection by Phytophthora parasitica. Notably, transient overexpression of CcDof4 and CcDof6 in citrus leaves significantly enhanced resistance to P. parasitica, accompanied by upregulation of SA pathway markers NPR1 and PR1. Our findings provide a systematic characterization of the CcDof family and highlight the important roles of CcDof4 and CcDof6 in mediating citrus disease resistance, likely through modulation of the SA signaling pathway.

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Cite This Study

Hu et al. (2026) studied this question.

synapsesocial.com/papers/69b4add218185d8a39801deehttps://doi.org/10.3390/horticulturae12030348
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