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March 14, 2026BMC Medical Genomics0 citationsOpen Access

Shared molecular signatures between atrial fibrillation and chronic obstructive pulmonary disease: an integrated bioinformatic analysis with experimental validation

WZWei ZhouQTQian TangDCDandan Chen

Key Result

CASP1 expression levels were significantly elevated in patients with atrial fibrillation, chronic obstructive pulmonary disease, and both conditions compared to healthy controls (P < 0.001).

Key Points

  • The study aims to uncover shared molecular signatures between atrial fibrillation and chronic obstructive pulmonary disease to better understand their co-occurrence.
  • Conducted differential expression analysis to identify shared DEGs between AF and COPD.
  • Performed functional enrichment analyses to determine biological processes associated with the shared DEGs.
  • Utilized protein-protein interaction (PPI) network analysis for candidate gene identification.
  • Validated findings with exploratory experiments on AF and COPD tissue samples.
  • Identified 208 shared differentially expressed genes (DEGs) between AF and COPD.
  • Functional analyses associated these DEGs with inflammatory and immune-related pathways.
  • Validation experiments confirmed elevated expression of CASP1, CXCR2, and IFIT5 across AF and COPD samples.

Structured PICO

P
Population
Publicly available transcriptomic datasets for atrial fibrillation (GSE79768, GSE41177) and chronic obstructive pulmonary disease (GSE29133, GSE56766), alongside a clinical validation cohort of 24 human subjects (6 healthy controls, 6 AF, 6 COPD, 6 AF+COPD) from China.
C
Comparator
Healthy controls and non-disease matched controls
O
Outcome
Shared differentially expressed genes (DEGs) and key hub genes between atrial fibrillation and chronic obstructive pulmonary diseasesurrogate

CASP1, CXCR2, and IFIT5 are shared inflammatory and immune-related biomarkers upregulated in both atrial fibrillation and COPD, providing a molecular framework for their frequent clinical co-occurrence.

Main Result

p-value: p=<0.001

Limitations

  • Small sample size limits stratified or adjusted analyses.
  • Exploratory findings require cautious interpretation.
  • small sample size of the clinical validation cohort (n = 6 per group)
  • exploratory nature of the study
  • no formal assumptions testing or multivariable adjustment for potential clinical confounders
  • small sample size precluded stratified or adjusted analyses

Abstract

Atrial fibrillation (AF) and chronic obstructive pulmonary disease (COPD) are highly prevalent conditions that significantly impact patient outcomes. While mounting evidence suggests a strong epidemiological and clinical association between AF and COPD, the molecular basis underlying their frequent co-occurrence remains incompletely characterized. Rather than inferring direct disease-specific mechanistic links, this study aimed to identify shared systemic inflammatory and immune-related transcriptional signatures that are detectable across different tissues in AF and COPD. A total of 208 DEGs were found to be shared between AF and COPD. Functional enrichment analyses indicated that these genes were predominantly associated with inflammatory, immune, and extracellular matrix–related biological processes, including the NOD-like receptor, Influenza A, Phospholipase D, and ECM-receptor interaction pathways. PPI network analysis and external dataset verification highlighted CASP1, CXCR2, and IFIT5 as reproducibly upregulated genes across independent AF and COPD transcriptomic datasets. Their elevated expression was further observed in AF, COPD, and comorbid samples in exploratory validation experiments. No single TF or miRNA was found to simultaneously regulate all three genes, suggesting heterogeneous and context-dependent regulatory patterns rather than a unified regulatory axis. Drug–gene association analysis identified estradiol and methyl methanesulfonate as compounds computationally linked to the shared gene set, without implying biological efficacy or therapeutic applicability. This study delineates shared inflammatory and immune-related transcriptional signatures observed across AF and COPD datasets, highlighting common pathways and candidate genes that may reflect systemic inflammatory states. These findings are hypothesis-generating and primarily reflect shared systemic inflammatory and immune responses rather than disease-specific causal mechanisms, providing a bioinformatic framework for future mechanistic and clinical investigations.

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Cite This Study

Zhou et al. (2026) studied Atrial fibrillation and chronic obstructive pulmonary disease (n=24). Bioinformatic analysis vs. Healthy controls was evaluated on Differential expression levels of CASP1, CXCR2, and IFIT5 (p=<0.001). CASP1 expression levels were significantly elevated in patients with atrial fibrillation, chronic obstructive pulmonary disease, and both conditions compared to healthy controls (P < 0.001).

synapsesocial.com/papers/69b4fa9ab39f7826a300b4f3https://doi.org/10.1186/s12920-026-02335-4
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