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April 5, 2026Cancer Research0 citations

Visualization And Analysis Of Cancer Genomics Data Using UCSC Xena

Abstract 5524: Visualization and analysis of cancer genomics data using UCSC Xena.

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Authors

MGM. S. GoldmanBCBrian CraftCLCally Lin

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Overview

UCSC Xena visualizes cancer genomics data, aiding gene expression insights and survival analysis in diverse studies.

Key Points

  • The aim is to provide a comprehensive tool for visualizing and analyzing cancer genomics data across various platforms.
  • Utilization of the UCSC Xena web tool for data integration and exploration.
  • Support for bulk and single-cell multi-omic data visualization.
  • Dynamic visualization features including 2D and 3D embedding views and spatial imaging.
  • Implementation of statistical analyses, differential expression analysis, and survival analysis.
  • Access to over 1500 genomics datasets across 50 cancer types.
  • Ability to visualize diverse data modalities from various platforms.
  • Support for dynamic correlations between different genomic features and clinical data.
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Cite This Study

Goldman et al. (2026) studied this question.

synapsesocial.com/papers/69d1fc70a79560c99a0a212ehttps://doi.org/10.1158/1538-7445.am2026-5524
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Also Consider

Synapse has enriched 5 closely related papers on similar clinical questions. Consider them for comparative context:

  1. 1Abstract 7406: Visualization and analysis of cancer genomics data using UCSC Xena2024
  2. 2scCancerExplorer: a comprehensive database for interactively exploring single-cell multi-omics data of human pan-cancer2024 · 1 citations
  3. 3Abstract 4169: Reading the map: An invitation to the resources of the Human Tumor Atlas Network2026
  4. 4Abstract 6830: Xenium <i>in situ</i> analysis and reproducibility study of multiple carcinomas for clinical studies2024 · 1 citations
  5. 5Abstract 1249: cBioPortal for Cancer Genomics2024 · 1 citations