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April 8, 2026Journal of Proteome Research0 citations

Stability-Based Machine Learning Identifies a Minimal Two-Protein Serum Signature for Early Silicosis

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XCXinlei ChuYLYe LiFWFang Wang

Key Points

  • To identify a minimal two-protein serum signature for the early diagnosis of silicosis using machine learning.
  • Discovery strategy utilized to identify proteins
  • Diagnostic performance evaluated through cross-validation
  • Analysis confirmed in a heterogeneous validation cohort
  • Bioinformatic analysis to associate serum levels with silicosis
  • Two-protein signature included IL8 and CCL3
  • Cross-validation AUC of 0.986 in the discovery cohort
  • Validation cohort AUC of 0.973 with 95% specificity and 77.5% sensitivity
  • Decreased serum levels of IL8 and CCL3 associated with early-stage silicosis

Abstract

Our discovery strategy identified a two-protein signature comprising IL8 and CCL3. This signature demonstrated excellent diagnostic performance in the discovery cohort, achieving a cross-validation AUC of 0.986 (95% CI: 0.975-1.000). Importantly, the model's robustness was confirmed in the heterogeneous validation cohort, where it achieved an outstanding AUC of 0.973 (95% CI: 0.936-1.000), with 95.0% specificity and 77.5% sensitivity. Bioinformatic analysis revealed that decreased serum levels of IL8 and CCL3 were associated with silicosis, providing novel diagnostic biomarkers and highlighting a complex, paradoxical shift in circulating chemokines during early-stage disease.

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Cite This Study

Chu et al. (2026) studied this question.

synapsesocial.com/papers/69d5f0d774eaea4b11a7a3c3https://doi.org/10.1021/acs.jproteome.5c00987
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