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November 15, 1995The Journal of Chemical Physics23,258 citations

A smooth particle mesh Ewald method

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UEUlrich EssmannLPL. PereraMBMax L. Berkowitz

Key Points

  • Reformulate the particle mesh Ewald method using B-spline interpolation to improve accuracy and computational efficiency in calculating long-range forces.
  • Replaced Lagrange interpolation with B-spline interpolation of structure factors within the particle mesh Ewald framework.
  • Derived analytic gradients and extended the method to generalized inverse-power potentials and efficient virial tensor calculations.
  • Achieved computational scaling of N log(N) with system size N, enabling arbitrary accuracy independent of total atom count.
  • Lowered computational expense for large biomolecular systems containing thousands of atoms to levels comparable to a 10 Å simple truncation method.

Abstract

The previously developed particle mesh Ewald method is reformulated in terms of efficient B-spline interpolation of the structure factors. This reformulation allows a natural extension of the method to potentials of the form 1/rp with p≥1. Furthermore, efficient calculation of the virial tensor follows. Use of B-splines in place of Lagrange interpolation leads to analytic gradients as well as a significant improvement in the accuracy. We demonstrate that arbitrary accuracy can be achieved, independent of system size N, at a cost that scales as N log(N). For biomolecular systems with many thousands of atoms this method permits the use of Ewald summation at a computational cost comparable to that of a simple truncation method of 10 Å or less.

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Cite This Study

Essmann et al. (1995) studied this question.

synapsesocial.com/papers/69d696f096200ba434db835ehttps://doi.org/10.1063/1.470117
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