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April 19, 2026Chemistry & Biodiversity0 citations

Pyrimidine Derivatives Containing a Thiosemicarbazide Moiety as Potential Antioxidant and α‐Glucosidase Inhibitors: Synthesis, Bioactivity Evaluation, Molecular Docking, Molecular Dynamics Simulation, ADMET, and Drug‐Likeness Studies

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PLPei LiQLQing LiuYWYongxiang Wu

Key Points

  • The aim is to synthesize and evaluate the bioactivity of pyrimidine derivatives containing thiosemicarbazide.
  • Synthesis of pyrimidine derivatives with thiosemicarbazide moiety.
  • Characterization using 1H NMR, 13C NMR, and HRMS.
  • Evaluation of antioxidant and α‐glucosidase inhibitory activities via in vitro assays.
  • Molecular docking and dynamics simulations to assess binding affinity.
  • ADMET and drug-likeness analysis.
  • Compound 5a shows IC50 of 3.96 µg/mL in DPPH and 2.01 µg/mL in ABTS radical scavenging tests.
  • Compound 5k exhibits α‐glucosidase inhibition with IC50 of 38.62 µg/mL, significantly lower than acarbose.
  • Molecular docking demonstrates strong binding of 5a and 5k to NADPH oxidase and human intestinal α‐glucosidase respectively.
  • Molecular dynamics simulations indicate stable interactions primarily through van der Waals forces.
  • ADMET analysis suggests compound 5k has favorable physicochemical properties for drug development.

Abstract

ABSTRACT In this study, a series of pyrimidine derivatives incorporating a thiosemicarbazide functional group were synthesized, and their structures were thoroughly characterized using 1 H NMR, 13 C NMR, and HRMS. Biological assays demonstrate that compound 5a exhibits exceptional in vitro antioxidant activity, with IC 50 values of 3.96 µg/mL for DPPH radical scavenging and 2.01 µg/mL for ABTS radical scavenging, both of which are lower than those of the reference standards vitamin C (6.38 µg/mL) and trolox (8.04 µg/mL). Compound 5k shows significant in vitro α‐glucosidase inhibitory activity, achieving an IC 50 value of 38.62 µg/mL, which is markedly lower than that of acarbose (237.48 µg/mL). Meanwhile, molecular docking results reveal that compounds 5a and 5k establish strong binding affinity to intermolecular interactions with the active site of the NADPH oxidase (PDB ID: 2CDU) and human intestinal α‐glucosidase (PDB: 3TOP), respectively. Furthermore, molecular dynamics (MD) simulations indicate that compounds 5a and 5k forms stable interaction with the NADPH oxidase and human intestinal α‐glucosidase, primarily driven by van der Waals forces. In addition, ADMET and drug‐likeness analysis results show that the compound 5k is safety and possess favorable physicochemical properties suitable for potential drug candidate.

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Cite This Study

Li et al. (2026) studied this question.

synapsesocial.com/papers/69e47376010ef96374d8f330https://doi.org/10.1002/cbdv.71240
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