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April 24, 2026Nature Biomedical Engineering4 citationsOpen Access

3D foundation model for generalizable disease detection in head computed tomography

WZWeicheng ZhuHHHaoxu HuangHTHuanze Tang

Key Points

  • To develop and evaluate a foundation model that enhances disease detection in head CT imaging using self-supervised learning.
  • Developed a foundation model (FM-HCT) for head CT scans using self-supervised learning.
  • Trained on 361,663 non-contrast 3D head CT scans without manual annotations.
  • Evaluated the model's performance against previous models and those trained from scratch.
  • The foundation model significantly outperformed previous approaches in diagnostic performance.
  • Demonstrated robustness in detecting a variety of diseases in head CT images.
  • Improved accuracy was shown in downstream diagnostic tasks.

Abstract

Abstract Head computed tomography (CT) imaging is a widely used imaging modality with multitudes of medical indications, particularly in assessing pathology of the brain, skull and cerebrovascular system. It is commonly used as the first-line imaging in neurologic emergencies given its rapidity of image acquisition, safety, cost and ubiquity. Deep learning models may facilitate detection of a wide range of diseases. However, the scarcity of high-quality labels and annotations, particularly among less common conditions, substantially hinders the development of powerful models. To address this challenge, we introduce FM-HCT, a Foundation Model for Head CT for generalizable disease detection, trained using self-supervised learning. Our approach pretrains a deep learning model on a large, diverse dataset of 361,663 non-contrast 3D head CT scans without the need for manual annotations, enabling the model to learn robust, generalizable features. Our results demonstrate that the self-supervised foundation model substantially improves performance on downstream diagnostic tasks compared to models trained from scratch and previous 3D CT foundation models trained on scarce annotated datasets.

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Cite This Study

Zhu et al. (2026) studied this question.

synapsesocial.com/papers/69eb0b50553a5433e34b511dhttps://doi.org/10.1038/s41551-026-01668-w
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