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May 7, 2026Nature Neuroscience0 citationsOpen Access

Molecular mechanism of calcium permeability and magnesium block in NMDA receptors

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RSRuben SteigerwaldMEMax EpsteinTCTsung‐Han Chou

Key Points

  • To elucidate the molecular mechanism behind calcium permeability and magnesium block in NMDA receptors.
  • Utilized single-particle cryo-electron microscopy to study NMDA receptor dynamics.
  • Examined calcium binding sites and their roles in permeability.
  • Analyzed the influence of lipid networks on magnesium binding stability.
  • Demonstrated that calcium influx involves partial dehydration at cation selectivity filter.
  • Showed magnesium binds outside the selectivity filter, acting as a channel blocker.
  • Highlighted the lipid network's influence on magnesium binding in a voltage-dependent manner.

Abstract

Abstract Hebbian neuroplasticity, which is thought to be a cellular substrate of learning and memory, can occur by means of coincidental detection of presynaptic neurotransmitter release and Ca 2+ influx upon postsynaptic depolarization. This is mediated at a molecular level by N -methyl- D -aspartate-type glutamate receptors, which bind glutamate and glycine and facilitate Ca 2+ influx upon relief of Mg 2+ channel block during membrane depolarization. However, the structural mechanism underlying Ca 2+ permeability and Mg 2+ blockade in N -methyl- D -aspartate-type glutamate receptors has yet to be fully elucidated. Here we demonstrate using single-particle cryo-electron microscopy that Ca 2+ permeation through the narrow constriction of the cation selectivity filter involves partial dehydration, as evidenced by several Ca 2+ binding sites. In contrast, Mg 2+ binds outside of the selectivity filter through a water network and remains hydrated, thereby acting as a channel blocker. Furthermore, the lipid network around the selectivity filter influences the stability of Mg 2+ binding in a voltage-dependent manner. Our study details the transmembrane chemistry essential for initiating neuroplasticity.

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Cite This Study

Steigerwald et al. (2026) studied this question.

synapsesocial.com/papers/69fbe357164b5133a91a29fehttps://doi.org/10.1038/s41593-026-02283-3
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