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May 14, 20260 citationsOpen Access

Guanine Assembly at Ice–Water Boundaries under Early Earth–Like Na+/K+ Ionic Conditions

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SKS. Kato

Key Points

  • This research aims to understand how guanine and cytosine behave under freeze-thaw cycles relevant to early Earth.
  • Conducted freeze-thaw cycling experiments with guanine and cytosine under Na⁺/K⁺ ionic conditions.
  • Measured changes in spectral properties to assess molecular interactions over five days.
  • Utilized quantum chemical calculations to evaluate association energies of guanine and cytosine assemblies.
  • Guanine shows progressive hypochromicity during cycling, with partial recovery at 5 °C and further restoration at 40 °C.
  • Cytosine does not exhibit detectable spectral changes and remains mostly monomeric under the same conditions.
  • Quantum calculations indicate guanine dimers and K⁺-stabilized quartets have significantly higher association energies than cytosine structures.

Abstract

Freeze–thaw cycles in icy environments have been proposed as potential drivers of prebiotic molecular organization, yet the behaviour of individual nucleobases under such fluctuating conditions remains insufficiently understood. Here, we show that guanine undergoes progressive hypochromicity during repeated freeze–thaw cycling under early Earth–like Na⁺/K⁺ ionic conditions, consistent with increased stacking‑related and hydrogen‑bonding interactions. The hypochromicity observed after five days partially recovers at 5 °C and is further restored by brief heating to 40 °C, consistent with a partially reversible interaction. In contrast, cytosine exhibits no detectable spectral changes and remains predominantly monomeric under identical conditions. Quantum chemical calculations reveal that guanine dimers and K⁺‑stabilized quartets possess substantially greater association energies than cytosine assemblies, providing a physicochemical basis for the observed differences. These findings suggest that freeze–thaw–driven guanine organization at ice–water boundaries may represent a plausible route toward prebiotic molecular structuring in cold, icy environments.

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Cite This Study

S. Kato (2026) studied this question.

synapsesocial.com/papers/6a05684ea550a87e60a20c02https://doi.org/10.5281/zenodo.20133866
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