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May 14, 2026Journal of the American Chemical Society0 citations

Condensate Formation by Structured dsRNA Binding Domains Drives RNA Sequestration in Plants

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JPJ. W. M. PaulDPDebadutta PatraPBPriti Chanda Behera

Key Points

  • This research aims to uncover the mechanisms by which dsRNA-binding proteins in plants sequester viral RNA and suppress replication.
  • Investigated the oligomerization and phase-separation properties of dsRBD2 in DRB2/3/5 upon interaction with dsRNA.
  • Analyzed modifications in surface charge distribution and self-association behavior under various conditions.
  • Explored the formation of gel-like condensates in response to dsRNA, molecular crowding, or ATP.
  • Phase separation of DRB2/3/5 was observed upon dsRNA interaction, with structural changes promoting interaction patches on dsRBD.
  • Concentration-dependent self-association resulted in gel-like condensate formation, contributing to antiviral responses.
  • The findings suggest that condensate formation plays a significant role in enhancing plant immunity against viral infections.

Abstract

A key antiviral strategy in plants involves the sequestration of viral genomic RNA by dsRNA-binding proteins DRB2, DRB3, and DRB5 within phase-separated viral replication complexes (VRCs). While these proteins colocalize in VRC condensates to suppress viral replication, the molecular mechanisms underlying viral RNA sequestration and replication arrest in the antiviral defense pathway remain enigmatic. Here, we show that the oligomerization-prone dsRBD2 domain of DRB2/3/5 adopts a modified dsRBD fold and undergoes phase separation upon interaction with dsRNA. We find that the structural modifications lead to a unique surface charge distribution that promotes multivalent, surface-exposed interaction patches on dsRBD. These features enable concentration-dependent transient self-association in DRB2/3/5 and guide the formation of gel-like condensates in the presence of individual triggers such as dsRNA, molecular crowding, or ATP. Our study identifies a plausible mechanism of dsRNA-binding protein induced phase separation and suggests that RNA sequestration via condensate formation contributes to plant antiviral immunity.

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Cite This Study

Paul et al. (2026) studied this question.

synapsesocial.com/papers/6a05685ca550a87e60a20da3https://doi.org/10.1021/jacs.6c05034
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