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May 17, 2026Analytical Chemistry1 citations

CRISPR–Cas12a2-Based Multiplexed Diagnostic for Rapid and Highly Sensitive Detection of Respiratory Viruses

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CLChuncao LiuMFMeng Feng喻喻荷淋

Key Points

  • This research aims to develop a rapid and sensitive diagnostic platform for detecting respiratory viruses using a novel CRISPR-based approach.
  • Utilized a multiplex diagnostic platform combining transcription-mediated amplification and CRISPR-Cas12a2.
  • Employed an integrated microfluidic chip for simultaneous detection of influenza A/B and respiratory syncytial viruses.
  • Conducted clinical validation with nasopharyngeal swabs against real-time quantitative reverse transcription polymerase chain reaction.
  • Achieved detection limits as low as 102 copies/μL within 60 min.
  • Demonstrated high concordance with real-time quantitative reverse transcription polymerase chain reaction.
  • Detected most positive samples within 40 min with no observed nonspecific reactions.

Abstract

Infectious diseases severely threaten global public health security, necessitating rapid and highly sensitive diagnosis. This study presents a novel multiplex diagnostic platform combining transcription-mediated amplification (TMA) with the CRISPR–Cas12a2 system for rapid and highly sensitive detection of respiratory viruses. The assay uses an integrated microfluidic chip, which can simultaneously identify influenza A/B and respiratory syncytial viruses (RSV-A/B) with optimized CRISPR RNAs and isothermal amplification, achieving detection limits as low as 102 copies/μL within 60 min. The detection system showed excellent specificity; nonspecific reactions were not observed in the presence of nucleic acids from other respiratory pathogens. Clinical validation using nasopharyngeal swabs demonstrated high concordance with real-time quantitative reverse transcription polymerase chain reaction, with most positive samples detected within 40 min. The system eliminates DNA amplification steps, reduces contamination risk, and simplifies the workflow. Using two-step reactions on a centrifugal microfluidic chip, the TMA–CRISPR–Cas12a2 platform offers a promising integrated platform for multiplex respiratory pathogen screening, thereby supporting timely diagnosis and outbreak management.

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Cite This Study

Liu et al. (2026) studied this question.

synapsesocial.com/papers/6a095ac47880e6d24efe0962https://doi.org/10.1021/acs.analchem.5c07791
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