PulseExploreJournal ClubDebatesTrendingResearchersJournals
Instagram
HomeExploreJournal ClubTrending
Synapse
⌘+K
Synapse
May 17, 2026Microorganisms0 citationsOpen Access

Analytical Performance and Inter-Method Agreement of a Laboratory-Developed CMV qPCR Assay in Clinical Plasma Samples

View Full Paper
MAMurat AralABAyfer BakırCÇCemal Çiçek

Key Points

  • This study aims to assess the analytical performance and agreement of a laboratory-developed CMV qPCR assay against a commercial reference method.
  • Analyzed 100 EDTA plasma samples using laboratory-developed CMV qPCR and Roche Cobas® CMV reference method.
  • Determined analytical sensitivity via synthetic DNA and calculated limit of detection using probit regression analysis.
  • Evaluated correlations with Spearman rank and agreement using Bland–Altman method.
  • Limit of detection (LoD95) for the laboratory-developed assay was 63.8 copies/µL.
  • Spearman rank analysis showed a weak correlation (ρ = 0.32; p = 0.22; n = 16) between the two methods.
  • Bland–Altman analysis indicated a mean difference of −0.48 log10 units, with most measurements within the 95% limits of agreement.

Abstract

Background: Cytomegalovirus (CMV) viral load monitoring forms the basis of preemptive treatment strategies in patients undergoing solid organ and hematopoietic stem cell transplantation. This study aimed to evaluate the analytical performance and inter-method agreement of a laboratory-developed CMV real-time PCR (qPCR) test compared to a commercial reference method using plasma samples. Methods: A total of 100 EDTA plasma samples were analyzed in parallel using a laboratory-developed CMV qPCR test and the reference method (Roche Cobas® CMV). Analytical sensitivity was determined us-ing synthetic DNA cloned into the pUC57 plasmid backbone containing the US17 region of the CMV genome, and the limit of detection (LoD95) was calculated using probit regression analysis. The relationship between the quantitative results obtained from clinical samples was evaluated using the Spearman rank correlation coefficient, while inter-method clinical agreement was assessed using the Bland–Altman method. Results: The limit of detection (LoD95) of the laboratory-developed CMV qPCR test, as determined by probit regression analysis, was 63.8 copies/µL. A weak and statistically non-significant correlation was ob-served between the laboratory-developed CMV qPCR test and the reference method in Spearman rank correlation analysis of samples for which numerical quantitative results were available from both methods (ρ = 0.32; p = 0.22; n = 16). Bland–Altman analysis showed a mean difference of −0.48 log10 units, with the vast majority of measurements falling within the 95% limits of agreement. Conclusions: The assay demonstrated measurable analytical performance and inter-method agreement; however, its use for quantitative viral load monitoring, particularly at low CMV DNA levels, should be interpreted with caution.

Ask AI
Helpful
Bookmark
Share
View Full Paper

Cite This Study

Aral et al. (2026) studied this question.

synapsesocial.com/papers/6a095c037880e6d24efe204fhttps://doi.org/10.3390/microorganisms14051127
Ask AI
Helpful
Bookmark
Share
View Full Paper