New Insights into the Taxonomy and Ecological Diversity of the Genus Poterioochromonas (Chrysophyceae)

Poterioochromonas is a typical mixotrophic chrysophyte that plays an important ecological role in natural aquatic environments and has received particular attention from morphological and ecological perspectives over the last few decades because of its peculiar mode of feeding and relevance for practical applications. However, the taxonomic classification of this genus remains controversial, and the true extent of its diversity remains largely unknown. Here, we use a complementary approach of culturing, morphological and phylogenetic analyses, and sequence database mining to address this issue. We collected 16 cultures of Poterioochromonas to determine the essential morphological characteristics and clarify the taxonomy and phylogeny of the genus. Our results confirmed that all Poterioochromonas strains produce lorica, which is the diagnostic character for the genus. We suggest that the shape of the lorica cup and the morphology of the cyst could be used as diagnostic characteristics to differentiate different species within the genus. Molecular phylogenetic analysis based on the SSU rDNA and rbcL gene sequences confirmed the monophyly of Poterioochromonas, which is subdivided into heterotrophic and mixotrophic clades. Comparative analysis of six molecular markers revealed that the COI gene is the most sensitive for distinguishing both inter- and intraspecific relationships. An exhaustive screening of the NCBI GenBank database and publicly available amplicon sequencing datasets revealed 100 SSU rDNA gene sequences for Poterioochromonas. The results showed that many soil-derived environmental sequences grouped with heterotrophic Poterioochromonas and indicated that the heterotrophic representatives of the genus are abundant in the soil environment. The results also revealed that many environmental sequences did not group with any reference sequences of known species, indicating that the genus Poterioochromonas is much more diverse than previously thought. This study contributes to a clearer taxonomic and distributional framework for Poterioochromonas, thereby facilitating future basic and applied research on this genus and similar mixotrophic chrysophytes.