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June 1, 2026Cell Biology and Toxicology0 citationsOpen Access

Integrative multi-omics, machine learning, and experimental validation reveal that TPM1 suppresses M2 macrophage polarization and enhances chemosensitivity in acute myeloid leukemia

YLYue LiBWBaosheng WeiLHLiuping Hu

Key Points

  • This study investigates the role of TPM1 in acute myeloid leukemia (AML) and its regulatory effects on chemosensitivity and macrophage polarization.
  • Integrative transcriptomic and proteomic analyses using GSE30029 and PXD008378
  • Machine learning techniques including LASSO, SVM-RFE, and random forest
  • Functional validation in AML cell lines through various assays and a subcutaneous xenograft model.
  • TPM1 was downregulated in AML tissues and cells, enhancing AML cell growth and drug resistance.
  • Overexpression of TPM1 inhibited AML cell proliferation and improved sensitivity to cytarabine (Ara-C).
  • TPM1 upregulation reduced M2 macrophage polarization, with the FTO/m6A pathway affecting TPM1 mRNA stability.

Abstract

BACKGROUND: Acute myeloid leukemia (AML) remains a therapeutic challenge due to chemoresistance and immunosuppression. This study aimed to discover novel regulatory mechanisms in AML pathogenesis. METHODS: Integrative transcriptomic (GSE30029) and proteomic (PXD008378) analyses with machine learning (LASSO, SVM-RFE, random forest) were performed to identify core AML regulators. Functional validation was conducted in AML cell lines (HL-60, NB4), including cell proliferation and apoptosis assays, cytarabine (Ara-C) sensitivity testing, and a subcutaneous xenograft model. Macrophage polarization was evaluated in co-culture systems. Molecular mechanisms were explored via MeRIP, RIP, and mRNA stability assays. RESULTS: Tropomyosin 1 (TPM1) was identified as a potential key factor in AML. TPM1 was downregulated in AML tissues and cells. TPM1 overexpression inhibited AML cell proliferation, promoted apoptosis and oxidative stress, and enhanced sensitivity to Ara-C. Furthermore, TPM1 upregulation attenuated M2 macrophage polarization. Mechanistically, the m6A eraser fat mass and obesity-associated protein (FTO) destabilized TPM1 mRNA in an m6A-dependent manner. Downregulation of TPM1 reversed the effects of FTO depletion on AML cell proliferation, Ara-C sensitivity, and M2 macrophage polarization. CONCLUSION: This study unveils a novel FTO/m6A/TPM1 axis that coordinately governs AML cell growth, chemosensitivity, and macrophage polarization, highlighting it as a promising therapeutic target.

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Cite This Study

Li et al. (2026) studied this question.

synapsesocial.com/papers/6a1d21e502fbce9130637c68https://doi.org/10.1007/s10565-026-10201-3
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