Evaluation and Selection of Rubus spp.× Rubus chingii Hybrids with Excellent Overall Fruit Quality and High Drought Tolerance

Blackberry cultivars typically exhibit high fruit antioxidant levels but poor drought tolerance compared with their wild Rubus relatives. Few studies have employed wild Rubus species in hybridization programs aimed at improving drought tolerance and fruit quality in cultivated blackberries. In this study, we comprehensively assessed growth traits, fruit characteristics, and drought tolerance in 108 F1 progenies derived from a cross between the cultivated blackberry ‘Prime-Ark® Freedom’ and the wild species Rubus chingii. Correlation analysis of fruit morphological traits indicated significant positive associations among single fruit weight, fruit thickness, and fruit diameter, reflecting coordinated fruit development. Among the nutritional quality traits evaluated, both anthocyanin and total phenolic contents exhibited transgressive segregation. Specifically, 47.78% of the progeny demonstrated higher anthocyanin content, and 45.56% exhibited greater total phenolic content than the higher-performing parent. The corresponding genetic transmission ability (Ta) reached 139.23% and 101.24% for these traits, respectively, indicating pronounced additive genetic effects and high heritability. After a 7-day drought treatment, the hybrid progenies exhibited significant heterosis in catalase (CAT) activity, with 24.07% exceeding the higher-parent value. In contrast, proline content exhibited high broad-sense heritability (H2 = 0.990) and considerable genetic variation. Under drought stress, all chlorophyll components were strongly positively correlated. Using principal component analysis (PCA), we established comprehensive evaluation models for fruit quality and drought tolerance. Based on these models, seven accessions—H3, H4, H8, H10, H11, H14, and H25—were identified as superior in both drought tolerance and fruit quality. This study provides an integrated evaluation framework for selecting drought-tolerant and high-quality genotypes from interspecific hybrid progenies in blackberry, offering a theoretical basis for utilizing wild Rubus resources in breeding improved cultivars.